Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm5302-201ENSMUST00000202130 796 ntBASIC8.93□□□□□ -0.98
Rom1P32958 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.93□□□□□ -0.98
Rom1P32958 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Rom1P32958 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Rom1P32958 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.93□□□□□ -0.98
Rom1P32958 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.93□□□□□ -0.98
Rom1P32958 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.93□□□□□ -0.98
Rom1P32958 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rom1P32958 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Gm45828-201ENSMUST00000206938 1836 ntBASIC8.92□□□□□ -0.98
Rom1P32958 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC8.92□□□□□ -0.98
Rom1P32958 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC8.92□□□□□ -0.98
Rom1P32958 Gm6013-201ENSMUST00000212264 699 ntBASIC8.92□□□□□ -0.98
Rom1P32958 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.92□□□□□ -0.98
Rom1P32958 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.92□□□□□ -0.98
Rom1P32958 AC122459.1-201ENSMUST00000228373 885 ntBASIC8.92□□□□□ -0.98
Rom1P32958 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rom1P32958 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.92□□□□□ -0.98
Rom1P32958 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Rom1P32958 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
Rom1P32958 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC8.92□□□□□ -0.98
Rom1P32958 Gm5124-202ENSMUST00000132683 2083 ntBASIC8.92□□□□□ -0.98
Rom1P32958 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rom1P32958 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC8.91□□□□□ -0.98
Rom1P32958 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.91□□□□□ -0.98
Rom1P32958 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rom1P32958 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC8.91□□□□□ -0.98
Rom1P32958 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.91□□□□□ -0.98
Rom1P32958 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rom1P32958 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms