Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Btrc-209ENSMUST00000224478 2194 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm9133-201ENSMUST00000118289 540 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm12516-201ENSMUST00000120819 385 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm13117-201ENSMUST00000120894 691 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm11675-201ENSMUST00000121873 832 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm25554-201ENSMUST00000158075 113 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm30946-201ENSMUST00000198288 724 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm3793-201ENSMUST00000204973 672 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm45856-201ENSMUST00000212752 416 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm16380-201ENSMUST00000077997 478 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Gm25517-201ENSMUST00000083865 134 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.43□□□□□ -0.9
Col8a2P25318 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm25343-201ENSMUST00000157460 107 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm7600-201ENSMUST00000209657 785 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Col8a2P25318 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.42□□□□□ -0.9
Col8a2P25318 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
Col8a2P25318 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Col8a2P25318 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Col8a2P25318 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.42□□□□□ -0.9
Col8a2P25318 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.41□□□□□ -0.9
Col8a2P25318 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.41□□□□□ -0.9
Col8a2P25318 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Col8a2P25318 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms