Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf1bP25119 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf1bP25119 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm4294-201ENSMUST00000105169 614 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm15131-201ENSMUST00000119124 595 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Olfml3-204ENSMUST00000169286 874 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm28925-201ENSMUST00000188586 168 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfrsf1bP25119 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm22334-201ENSMUST00000158070 133 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm23694-201ENSMUST00000179335 110 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm5523-201ENSMUST00000180415 997 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm10731-201ENSMUST00000181171 448 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm37284-201ENSMUST00000193607 539 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm37002-201ENSMUST00000194560 373 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm44980-201ENSMUST00000205826 314 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfrsf1bP25119 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms