Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6bP23440 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6bP23440 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pde6bP23440 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.44□□□□□ -0.42
Pde6bP23440 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Pde6bP23440 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6bP23440 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6bP23440 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6bP23440 Gm13600-201ENSMUST00000117949 744 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Gm12030-201ENSMUST00000121917 223 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.43□□□□□ -0.42
Pde6bP23440 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Gm18561-201ENSMUST00000206027 804 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.43□□□□□ -0.42
Pde6bP23440 Gm5468-202ENSMUST00000227851 682 ntBASIC12.43□□□□□ -0.42
Pde6bP23440 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6bP23440 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6bP23440 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.43□□□□□ -0.42
Pde6bP23440 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6bP23440 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6bP23440 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6bP23440 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Pde6bP23440 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.42□□□□□ -0.42
Pde6bP23440 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6bP23440 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.42□□□□□ -0.42
Pde6bP23440 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm12274-201ENSMUST00000120062 385 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.42□□□□□ -0.42
Pde6bP23440 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.42□□□□□ -0.42
Pde6bP23440 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm3726-201ENSMUST00000203110 785 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.42□□□□□ -0.42
Pde6bP23440 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Pde6bP23440 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6bP23440 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.42□□□□□ -0.42
Pde6bP23440 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.42□□□□□ -0.42
Pde6bP23440 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6bP23440 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.42□□□□□ -0.42
Pde6bP23440 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6bP23440 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms