Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Ccl3P10855 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.99□□□□□ -0.81
Ccl3P10855 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Ccl3P10855 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ccl3P10855 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl3P10855 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl3P10855 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm23745-201ENSMUST00000104230 125 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm12986-201ENSMUST00000119037 967 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccl3P10855 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm25569-201ENSMUST00000157175 131 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm26368-201ENSMUST00000157826 118 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm19927-201ENSMUST00000185792 781 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccl3P10855 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm42751-201ENSMUST00000198065 559 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 BC080696-201ENSMUST00000202858 1218 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Gm42867-201ENSMUST00000202995 469 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm7589-201ENSMUST00000085631 534 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Ccl3P10855 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Ccl3P10855 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.98□□□□□ -0.81
Ccl3P10855 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl3P10855 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccl3P10855 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.97□□□□□ -0.81
Ccl3P10855 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.97□□□□□ -0.81
Ccl3P10855 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Ccl3P10855 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccl3P10855 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccl3P10855 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Ccl3P10855 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Ccl3P10855 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms