Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp6P0C0A3 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chmp6P0C0A3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp6P0C0A3 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm43947-201ENSMUST00000203019 959 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp6P0C0A3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms