Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm25414-201ENSMUST00000101814 107 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm33571-201ENSMUST00000193271 657 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm37835-201ENSMUST00000193305 361 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.11□□□□□ -0.95
Hoxd3P09027 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.11□□□□□ -0.95
Hoxd3P09027 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Hoxd3P09027 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hoxd3P09027 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 AC139754.2-201ENSMUST00000218037 1455 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm13341-201ENSMUST00000120780 672 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm6114-201ENSMUST00000182472 968 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm3508-201ENSMUST00000186012 792 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm9517-201ENSMUST00000195021 874 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm6450-201ENSMUST00000200896 574 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.1□□□□□ -0.95
Hoxd3P09027 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.1□□□□□ -0.95
Hoxd3P09027 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hoxd3P09027 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Hoxd3P09027 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms