Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Hcn1O88704 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Gm12165-201ENSMUST00000117047 342 ntBASIC10.86□□□□□ -0.67
Hcn1O88704 Gm13809-201ENSMUST00000117921 597 ntBASIC10.86□□□□□ -0.67
Hcn1O88704 Gm13263-201ENSMUST00000121271 838 ntBASIC10.86□□□□□ -0.67
Hcn1O88704 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.86□□□□□ -0.67
Hcn1O88704 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.86□□□□□ -0.67
Hcn1O88704 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.86□□□□□ -0.67
Hcn1O88704 Gm6450-201ENSMUST00000200896 574 ntBASIC10.86□□□□□ -0.67
Hcn1O88704 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.86□□□□□ -0.67
Hcn1O88704 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Hcn1O88704 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.86□□□□□ -0.67
Hcn1O88704 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.86□□□□□ -0.67
Hcn1O88704 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hcn1O88704 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hcn1O88704 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Hcn1O88704 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hcn1O88704 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hcn1O88704 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.85□□□□□ -0.67
Hcn1O88704 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.85□□□□□ -0.67
Hcn1O88704 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.85□□□□□ -0.67
Hcn1O88704 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Ginm1-202ENSMUST00000065124 300 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hcn1O88704 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Hcn1O88704 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.85□□□□□ -0.67
Hcn1O88704 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Hcn1O88704 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hcn1O88704 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms