Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Rnf13O54965 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm11509-201ENSMUST00000117358 325 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm14381-201ENSMUST00000122105 414 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm20495-201ENSMUST00000173902 235 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm25700-201ENSMUST00000177693 110 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf13O54965 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm27627-201ENSMUST00000183644 150 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm43184-201ENSMUST00000197247 542 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Gm45224-201ENSMUST00000208203 414 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf13O54965 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf13O54965 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.24□□□□□ -0.77
Rnf13O54965 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm15207-201ENSMUST00000119259 442 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Gm7150-201ENSMUST00000122032 981 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.23□□□□□ -0.77
Rnf13O54965 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm44364-201ENSMUST00000198368 141 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.23□□□□□ -0.77
Rnf13O54965 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.23□□□□□ -0.77
Rnf13O54965 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Rnf13O54965 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Rnf13O54965 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf13O54965 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rnf13O54965 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf13O54965 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms