Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Polr1aO35134 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC17.13■□□□□ 0.33
Polr1aO35134 Gm13857-201ENSMUST00000139645 173 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 Gm5274-201ENSMUST00000182641 1003 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 Atf7-201ENSMUST00000096143 390 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Polr1aO35134 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Polr1aO35134 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC17.12■□□□□ 0.33
Polr1aO35134 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC17.12■□□□□ 0.33
Polr1aO35134 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC17.12■□□□□ 0.33
Polr1aO35134 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Polr1aO35134 Ighv1-86-201ENSMUST00000200562 353 ntBASIC17.12■□□□□ 0.33
Polr1aO35134 Gm42710-201ENSMUST00000200608 985 ntBASIC17.12■□□□□ 0.33
Polr1aO35134 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC17.12■□□□□ 0.33
Polr1aO35134 Gm8557-201ENSMUST00000220777 475 ntBASIC17.12■□□□□ 0.33
Polr1aO35134 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Polr1aO35134 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr1aO35134 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Gm12950-201ENSMUST00000121683 417 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 Gm27833-201ENSMUST00000184285 124 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 Gm8226-201ENSMUST00000190511 798 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 Gm42859-201ENSMUST00000199572 193 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 AC154477.1-201ENSMUST00000226515 773 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 AC137842.2-201ENSMUST00000227734 797 ntBASIC17.11■□□□□ 0.33
Polr1aO35134 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Polr1aO35134 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Polr1aO35134 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC17.11■□□□□ 0.33
Polr1aO35134 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC17.1■□□□□ 0.33
Polr1aO35134 Gm24074-201ENSMUST00000158178 260 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Gm37860-201ENSMUST00000195380 1034 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC17.1■□□□□ 0.33
Polr1aO35134 AC166574.4-201ENSMUST00000227165 1937 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Mir291b-201ENSMUST00000104838 79 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Gm15815-201ENSMUST00000120569 255 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Gm16305-201ENSMUST00000140747 556 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC17.1■□□□□ 0.33
Polr1aO35134 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Polr1aO35134 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 AC140314.1-201ENSMUST00000219549 554 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 AC161172.1-201ENSMUST00000227801 486 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Polr1aO35134 Gm5278-201ENSMUST00000055957 552 ntBASIC17.1■□□□□ 0.33
Polr1aO35134 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Polr1aO35134 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC17.09■□□□□ 0.33
Polr1aO35134 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Polr1aO35134 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Polr1aO35134 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms