Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cpsf4lE9Q2N0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Mir1943-201ENSMUST00000158276 73 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm19246-201ENSMUST00000173599 255 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm43947-201ENSMUST00000203019 959 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cpsf4lE9Q2N0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm13422-201ENSMUST00000118834 504 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm8302-201ENSMUST00000119217 852 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm11246-201ENSMUST00000120880 345 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm23771-201ENSMUST00000178702 110 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm27910-201ENSMUST00000185004 107 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms