Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm11540-201ENSMUST00000117457 780 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm43117-201ENSMUST00000198531 379 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm42859-201ENSMUST00000199572 193 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm44540-201ENSMUST00000205640 354 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm22388-201ENSMUST00000158194 248 ntBASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 AC163638.2-201ENSMUST00000224920 827 ntBASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 AC102523.1-201ENSMUST00000228706 1144 ntBASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Gm4778-201ENSMUST00000098878 1098 ntBASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hfm1D3Z4R1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm42913-201ENSMUST00000197936 1853 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm15031-201ENSMUST00000121341 210 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm13857-201ENSMUST00000139645 173 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm26943-201ENSMUST00000182295 957 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm4960-201ENSMUST00000182928 1001 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm9409-201ENSMUST00000197017 316 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm42687-201ENSMUST00000199075 164 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms