Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm37039-201ENSMUST00000193733 2485 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm31049-201ENSMUST00000201516 1302 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm5620-201ENSMUST00000077991 1348 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm44798-201ENSMUST00000208123 2410 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm6802-201ENSMUST00000167843 1983 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 AC164107.1-201ENSMUST00000227730 2161 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm37504-201ENSMUST00000192537 2374 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 AC126262.1-201ENSMUST00000221802 1904 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm7146-201ENSMUST00000116079 739 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11249-201ENSMUST00000117071 859 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm13087-201ENSMUST00000118298 256 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm6433-201ENSMUST00000118634 875 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Atf1-ps-201ENSMUST00000120608 810 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11658-201ENSMUST00000120913 1008 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11765-201ENSMUST00000121173 1205 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11797-201ENSMUST00000121336 754 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm12009-201ENSMUST00000121361 1100 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm13973-201ENSMUST00000121371 894 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm12297-201ENSMUST00000121380 979 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11909-201ENSMUST00000121424 759 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11679-201ENSMUST00000121830 779 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm13021-201ENSMUST00000135716 407 ntTSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm15881-201ENSMUST00000148792 942 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm22515-201ENSMUST00000158273 305 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm26167-201ENSMUST00000158423 253 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm22361-201ENSMUST00000158435 176 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm7335-201ENSMUST00000172475 373 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm20414-201ENSMUST00000172918 646 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm20523-201ENSMUST00000174340 1124 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm26461-201ENSMUST00000175064 290 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm21809-201ENSMUST00000178495 468 ntBASIC2.49□□□□□ -2.01
Gm4559A4IF42 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms