Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Speer3W4VSP1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm18881-201ENSMUST00000220450 1545 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm26143-201ENSMUST00000104480 108 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm6140-201ENSMUST00000192494 966 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm33571-201ENSMUST00000193271 657 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm43550-201ENSMUST00000200597 303 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm3961-201ENSMUST00000204425 994 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 AL589696.1-201ENSMUST00000225711 330 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm10312-201ENSMUST00000078515 489 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.91□□□□□ -0.5
Speer3W4VSP1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Speer3W4VSP1 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.9□□□□□ -0.5
Speer3W4VSP1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.9□□□□□ -0.5
Speer3W4VSP1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.9□□□□□ -0.5
Speer3W4VSP1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.9□□□□□ -0.5
Speer3W4VSP1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Speer3W4VSP1 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms