Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm3329-201ENSMUST00000159873 556 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm27530-201ENSMUST00000184096 98 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm4857-201ENSMUST00000192718 785 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm6867-201ENSMUST00000219165 425 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm10288-201ENSMUST00000084614 537 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm21811-201ENSMUST00000096485 930 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm3550W4VSN7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm15808-201ENSMUST00000119046 604 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm12501-201ENSMUST00000119163 529 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm12266-201ENSMUST00000120311 962 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm23085-201ENSMUST00000157849 293 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm17040-202ENSMUST00000170597 889 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm10807-201ENSMUST00000177134 795 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm2260-201ENSMUST00000184965 657 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm38151-201ENSMUST00000195085 289 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm3550W4VSN7 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms