Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb2S4R1M3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm15352-201ENSMUST00000118696 270 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm22144-201ENSMUST00000157402 102 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm37981-201ENSMUST00000194280 535 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb2S4R1M3 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm11836-201ENSMUST00000121022 441 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
H2afb2S4R1M3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms