Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm23949-201ENSMUST00000104027 127 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm23596-201ENSMUST00000104304 132 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm12463-201ENSMUST00000118271 849 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm8815-201ENSMUST00000173809 620 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm44008-201ENSMUST00000204345 412 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.22□□□□□ -0.77
H2afb3S4R1G7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm15711-201ENSMUST00000118889 535 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Mir1938-201ENSMUST00000158746 100 ntBASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2afb3S4R1G7 Gm37259-201ENSMUST00000193903 849 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms