Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Upk1bQ9Z2C6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm22133-201ENSMUST00000102082 109 ntBASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm8885-201ENSMUST00000189382 598 ntBASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Olfr284-202ENSMUST00000206647 966 ntBASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Upk1bQ9Z2C6 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Upk1bQ9Z2C6 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Gm15207-201ENSMUST00000119259 442 ntBASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Gm11783-201ENSMUST00000119549 885 ntBASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.45□□□□□ -0.74
Upk1bQ9Z2C6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms