Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tubd1Q9R1K7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubd1Q9R1K7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubd1Q9R1K7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Rgr-203ENSMUST00000225070 4704 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm25554-201ENSMUST00000158075 113 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Mir1943-201ENSMUST00000158276 73 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm25007-201ENSMUST00000083808 133 ntBASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubd1Q9R1K7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm25766-201ENSMUST00000104101 131 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Mir7076-201ENSMUST00000183519 74 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm28196-201ENSMUST00000187719 640 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm37301-201ENSMUST00000195412 568 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Gm10020-201ENSMUST00000081993 612 ntBASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubd1Q9R1K7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tubd1Q9R1K7 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms