Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm44498-201ENSMUST00000199509 111 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm43866-201ENSMUST00000203894 839 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm7405-201ENSMUST00000121476 1337 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm12736-201ENSMUST00000119330 236 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm14113-201ENSMUST00000121399 976 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm45258-201ENSMUST00000210042 853 ntBASIC13.25□□□□□ -0.29
Scn11aQ9R053 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn11aQ9R053 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Gm13981-201ENSMUST00000122360 447 ntBASIC13.24□□□□□ -0.29
Scn11aQ9R053 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Gm26957-201ENSMUST00000182645 977 ntBASIC13.24□□□□□ -0.29
Scn11aQ9R053 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.24□□□□□ -0.29
Scn11aQ9R053 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn11aQ9R053 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.23□□□□□ -0.29
Scn11aQ9R053 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn11aQ9R053 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms