Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm8365-201ENSMUST00000197334 648 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm43058-201ENSMUST00000197645 625 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm29787-201ENSMUST00000222129 849 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Phtf1Q9QZ09 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm13888-201ENSMUST00000119148 422 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm8302-201ENSMUST00000119217 852 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm22846-201ENSMUST00000157706 270 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm44323-201ENSMUST00000198689 129 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm30671-201ENSMUST00000214898 318 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Phtf1Q9QZ09 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Mir1956-201ENSMUST00000157748 65 ntBASIC12.41□□□□□ -0.42
Phtf1Q9QZ09 Gm25554-201ENSMUST00000158075 113 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms