Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm10263-201ENSMUST00000085163 300 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Upk3aQ9JKX8 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm12029-201ENSMUST00000120073 832 ntBASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm19459-201ENSMUST00000176240 835 ntBASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Upk3aQ9JKX8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12616-201ENSMUST00000118594 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm15131-201ENSMUST00000119124 595 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12624-201ENSMUST00000177615 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12621-201ENSMUST00000177760 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12615-201ENSMUST00000177970 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12622-201ENSMUST00000177975 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12627-201ENSMUST00000178412 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12625-201ENSMUST00000179122 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12614-201ENSMUST00000179586 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm12613-201ENSMUST00000180323 382 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm45550-201ENSMUST00000209380 946 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Gm5599-201ENSMUST00000209602 788 ntBASIC10.87□□□□□ -0.67
Upk3aQ9JKX8 Mt1-202ENSMUST00000211807 1085 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms