Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9□□□□□ -0.97
Smco4Q9JIS3 Gm42449-201ENSMUST00000200349 2258 ntBASIC9□□□□□ -0.97
Smco4Q9JIS3 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm4810-201ENSMUST00000177721 1607 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm38910-201ENSMUST00000204630 2448 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm4995-201ENSMUST00000117247 432 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm6548-201ENSMUST00000167498 1165 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm37042-201ENSMUST00000193816 581 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Smco4Q9JIS3 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm4784-201ENSMUST00000117365 1824 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm8805-201ENSMUST00000117848 313 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm11964-201ENSMUST00000120982 444 ntBASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.98□□□□□ -0.97
Smco4Q9JIS3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms