Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trim39Q9ESN2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Mir6420-201ENSMUST00000185032 102 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm8956-201ENSMUST00000203939 825 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm17812-201ENSMUST00000204935 318 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim39Q9ESN2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim39Q9ESN2 Gm27627-201ENSMUST00000183644 150 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms