Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm26463-201ENSMUST00000175065 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm24332-201ENSMUST00000175102 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25959-201ENSMUST00000175112 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm22475-201ENSMUST00000175169 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm22903-201ENSMUST00000175193 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25070-201ENSMUST00000175237 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm24159-201ENSMUST00000175264 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25299-201ENSMUST00000175283 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23798-201ENSMUST00000175560 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23802-201ENSMUST00000175565 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25708-201ENSMUST00000177687 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm24370-201ENSMUST00000178007 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23049-201ENSMUST00000178068 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm28019-201ENSMUST00000178138 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25571-201ENSMUST00000178322 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25355-201ENSMUST00000178456 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm24975-201ENSMUST00000178492 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23189-201ENSMUST00000178954 102 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm25100-201ENSMUST00000179750 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm23064-201ENSMUST00000179866 101 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Capsl-202ENSMUST00000226688 739 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm8181-201ENSMUST00000062242 669 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.13□□□□□ -0.63
Rrp8Q9DB85 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rrp8Q9DB85 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm22594-201ENSMUST00000104251 130 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm14165-201ENSMUST00000121456 952 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm29067-201ENSMUST00000190821 470 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm9369-201ENSMUST00000196009 733 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Gm18035-201ENSMUST00000211962 589 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.12□□□□□ -0.63
Rrp8Q9DB85 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms