Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sf3a3Q9D554 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.38□□□□□ -0.59
Sf3a3Q9D554 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3a3Q9D554 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms