Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm14723-201ENSMUST00000118686 215 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm43179-201ENSMUST00000198797 275 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska1Q9CPV1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm15198-201ENSMUST00000117283 177 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm12463-201ENSMUST00000118271 849 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm25668-201ENSMUST00000157700 129 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm27627-201ENSMUST00000183644 150 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska1Q9CPV1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms