Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gm24990-201ENSMUST00000157406 323 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Mir6420-201ENSMUST00000185032 102 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gm5369-201ENSMUST00000217499 588 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 BC043934-202ENSMUST00000185694 2356 ntBASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm23200-201ENSMUST00000104379 132 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm24844-201ENSMUST00000158679 127 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm7504-201ENSMUST00000201449 424 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm42867-201ENSMUST00000202995 469 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm44506-201ENSMUST00000206278 965 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim11Q99PQ2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Mir433-201ENSMUST00000093564 124 ntBASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim11Q99PQ2 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms