Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm17797-201ENSMUST00000182175 997 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm3379-201ENSMUST00000222259 642 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Mir6930-201ENSMUST00000183859 68 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm15031-201ENSMUST00000121341 210 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm44460-201ENSMUST00000196179 129 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm40414-201ENSMUST00000197608 481 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm28653-202ENSMUST00000227082 521 ntBASIC11.17□□□□□ -0.62
Cdh23Q99PF4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdh23Q99PF4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm23916-201ENSMUST00000158484 399 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm9578-201ENSMUST00000182354 753 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 AC134607.1-201ENSMUST00000214707 485 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms