Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm5451-201ENSMUST00000080545 579 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm14270-201ENSMUST00000118388 846 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm18776-201ENSMUST00000188833 654 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm19587-201ENSMUST00000191395 545 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm5340-201ENSMUST00000203733 880 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm43912-201ENSMUST00000204352 538 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm2553-201ENSMUST00000215986 605 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.98□□□□□ -0.81
Scrt1Q99M85 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Scrt1Q99M85 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Scrt1Q99M85 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Scrt1Q99M85 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.97□□□□□ -0.81
Scrt1Q99M85 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Scrt1Q99M85 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Scrt1Q99M85 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Scrt1Q99M85 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Scrt1Q99M85 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms