Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm8459-201ENSMUST00000162504 760 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm5186-201ENSMUST00000218781 920 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdk5rap3Q99LM2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm12196-201ENSMUST00000120954 262 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm7584-201ENSMUST00000175829 940 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Gm6722-201ENSMUST00000221586 390 ntBASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdk5rap3Q99LM2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm13350-201ENSMUST00000120519 479 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm2965-201ENSMUST00000198365 343 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm9353-201ENSMUST00000200472 604 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.73□□□□□ -0.53
Cdk5rap3Q99LM2 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms