Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Usp11Q99K46 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Usp11Q99K46 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.95□□□□□ -0.5
Usp11Q99K46 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm8199-201ENSMUST00000121323 823 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Usp11Q99K46 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm8815-201ENSMUST00000173809 620 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm45575-201ENSMUST00000210283 548 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.95□□□□□ -0.5
Usp11Q99K46 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Usp11Q99K46 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.95□□□□□ -0.5
Usp11Q99K46 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm13461-201ENSMUST00000120980 662 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.94□□□□□ -0.5
Usp11Q99K46 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 Gm5714-201ENSMUST00000197343 566 ntBASIC11.94□□□□□ -0.5
Usp11Q99K46 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Usp11Q99K46 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Usp11Q99K46 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Usp11Q99K46 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Usp11Q99K46 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms