Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Gm13351-201ENSMUST00000118087 414 ntBASIC13.38□□□□□ -0.27
Col20a1Q923P0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.38□□□□□ -0.27
Col20a1Q923P0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.38□□□□□ -0.27
Col20a1Q923P0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Rgr-203ENSMUST00000225070 4704 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Snord17-201ENSMUST00000104526 238 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm19587-201ENSMUST00000191395 545 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col20a1Q923P0 Gm8420-201ENSMUST00000097103 598 ntBASIC13.37□□□□□ -0.27
Col20a1Q923P0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm11560-201ENSMUST00000117567 948 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm25343-201ENSMUST00000157460 107 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col20a1Q923P0 Gm7525-201ENSMUST00000219425 454 ntBASIC13.36□□□□□ -0.27
Col20a1Q923P0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms