Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm7150-201ENSMUST00000122032 981 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm37981-201ENSMUST00000194280 535 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm38117-201ENSMUST00000194653 939 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm43610-201ENSMUST00000199117 365 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm3726-201ENSMUST00000203110 785 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm44882-201ENSMUST00000205702 802 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.15□□□□□ -0.3
Smc1bQ920F6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smc1bQ920F6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smc1bQ920F6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Mir671-201ENSMUST00000102432 98 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm23272-201ENSMUST00000104053 129 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm12419-201ENSMUST00000116649 636 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm10169-201ENSMUST00000121822 348 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm18201-201ENSMUST00000174735 875 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm44647-201ENSMUST00000207402 428 ntBASIC13.14□□□□□ -0.31
Smc1bQ920F6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smc1bQ920F6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Smc1bQ920F6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms