Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm15615-201ENSMUST00000118876 198 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm16219-201ENSMUST00000120096 274 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm21778-201ENSMUST00000178779 471 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm4654-201ENSMUST00000183305 982 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm37284-201ENSMUST00000193607 539 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb1Q91Y08 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Snord17-201ENSMUST00000104526 238 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm12218-201ENSMUST00000117666 399 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm11956-201ENSMUST00000119525 512 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm23694-201ENSMUST00000179335 110 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm9555-201ENSMUST00000200908 583 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhb1Q91Y08 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms