Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Mir1943-201ENSMUST00000158276 73 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gm23045-201ENSMUST00000175041 96 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Mir8093-201ENSMUST00000185043 137 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gm3508-201ENSMUST00000186012 792 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gm38151-201ENSMUST00000195085 289 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdhga4Q91XY4 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm12579-201ENSMUST00000118040 783 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm15131-201ENSMUST00000119124 595 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm15595-201ENSMUST00000120840 961 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm22144-201ENSMUST00000157402 102 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm12407-201ENSMUST00000180219 324 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm7467-201ENSMUST00000185173 652 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm3786-201ENSMUST00000202659 378 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdhga4Q91XY4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdhga4Q91XY4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga4Q91XY4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga4Q91XY4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga4Q91XY4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga4Q91XY4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms