Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm25591-201ENSMUST00000177317 94 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm8601-201ENSMUST00000182096 909 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm7833-201ENSMUST00000183288 990 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm38103-201ENSMUST00000191707 864 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm42687-201ENSMUST00000199075 164 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm7880-201ENSMUST00000203748 871 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm44908-201ENSMUST00000208610 266 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm45258-201ENSMUST00000210042 853 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm13608-201ENSMUST00000121807 1406 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx54Q8K4L0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm11700-201ENSMUST00000119409 403 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm5873-201ENSMUST00000177157 1066 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms