Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm26047-201ENSMUST00000157308 113 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm22146-201ENSMUST00000157397 288 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm26047-202ENSMUST00000198840 115 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm43380-201ENSMUST00000200421 220 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc17Q8CE13 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc17Q8CE13 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm15036-201ENSMUST00000118880 400 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm18460-201ENSMUST00000208088 464 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Gm45500-201ENSMUST00000211676 803 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc17Q8CE13 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc17Q8CE13 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc17Q8CE13 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc17Q8CE13 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc17Q8CE13 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms