Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm12380-201ENSMUST00000119012 544 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc87Q8CDL9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm17040-202ENSMUST00000170597 889 ntBASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc87Q8CDL9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms