Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm15207-201ENSMUST00000119259 442 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm38266-201ENSMUST00000194931 421 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm14127-201ENSMUST00000117906 678 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm26047-201ENSMUST00000157308 113 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm26047-202ENSMUST00000198840 115 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm42867-201ENSMUST00000202995 469 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm32111-201ENSMUST00000207689 846 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Lysmd4Q8CC84 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms