Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm44315-201ENSMUST00000203041 219 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm24992-201ENSMUST00000157412 130 ntBASIC12.47□□□□□ -0.41
Trim9Q8C7M3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm37284-201ENSMUST00000193607 539 ntBASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim9Q8C7M3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms