Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trub1Q8C0D0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trub1Q8C0D0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm15615-201ENSMUST00000118876 198 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm23694-201ENSMUST00000179335 110 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm29067-201ENSMUST00000190821 470 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trub1Q8C0D0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm15528-201ENSMUST00000117821 864 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm4726-201ENSMUST00000135604 736 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm6019-201ENSMUST00000148369 736 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm43058-201ENSMUST00000197645 625 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trub1Q8C0D0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms