Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Gm30946-201ENSMUST00000198288 724 ntBASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Erich3-203ENSMUST00000189969 3460 ntBASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sh3rf2Q8BZT2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Mir453-201ENSMUST00000104732 82 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm9133-201ENSMUST00000118289 540 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm28833-201ENSMUST00000189671 559 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh3rf2Q8BZT2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sh3rf2Q8BZT2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms