Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm13192-201ENSMUST00000101199 208 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm10443-201ENSMUST00000119024 210 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm15636-201ENSMUST00000119205 668 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm13624-201ENSMUST00000120263 462 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm15258-201ENSMUST00000153801 741 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm38007-201ENSMUST00000192187 313 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm20568-201ENSMUST00000197129 208 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm3527-201ENSMUST00000198905 460 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm44420-201ENSMUST00000203669 490 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm45745-201ENSMUST00000211447 1180 ntBASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Col16a1Q8BLX7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Gm11473-201ENSMUST00000118980 359 ntBASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 AC154461.1-201ENSMUST00000224207 1005 ntBASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col16a1Q8BLX7 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm14176-201ENSMUST00000121302 477 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Mir8111-201ENSMUST00000184463 137 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm45090-201ENSMUST00000208775 1148 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 AC154461.3-201ENSMUST00000224831 573 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms