Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Mir7051-201ENSMUST00000184167 73 ntBASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gm37458-201ENSMUST00000194055 410 ntBASIC11.33□□□□□ -0.6
Rpp38Q80UU2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rpp38Q80UU2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm3551-201ENSMUST00000190750 664 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm44100-201ENSMUST00000204329 436 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.32□□□□□ -0.6
Rpp38Q80UU2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm25076-201ENSMUST00000104098 132 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm24074-201ENSMUST00000158178 260 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Mir5132-201ENSMUST00000175166 71 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm9211-201ENSMUST00000182882 975 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms