Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh8Q7TSK3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm25063-201ENSMUST00000104666 94 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm15329-201ENSMUST00000121408 155 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm44158-201ENSMUST00000203881 505 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm18065-201ENSMUST00000221395 526 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pcdh8Q7TSK3 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh8Q7TSK3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm15744-201ENSMUST00000161734 213 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm9139-201ENSMUST00000218817 700 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm5468-202ENSMUST00000227851 682 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.2□□□□□ -0.62
Pcdh8Q7TSK3 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms