Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm43966-201ENSMUST00000203301 612 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Rps4l-202ENSMUST00000204242 789 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm17812-201ENSMUST00000204935 318 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm45433-201ENSMUST00000209386 247 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm8913-201ENSMUST00000209491 641 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm5455-201ENSMUST00000058710 715 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm24990-201ENSMUST00000157406 323 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm44262-201ENSMUST00000204969 372 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm8385-201ENSMUST00000058999 643 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ctdp1Q7TSG2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ctdp1Q7TSG2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ctdp1Q7TSG2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdp1Q7TSG2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms