Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm12986-201ENSMUST00000119037 967 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm25872-201ENSMUST00000177784 100 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Mir8091-201ENSMUST00000183602 139 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm37207-201ENSMUST00000194284 296 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm42511-201ENSMUST00000196160 234 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm6564-201ENSMUST00000075377 619 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm10580-201ENSMUST00000097985 396 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm10582-201ENSMUST00000097987 396 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm10583-201ENSMUST00000097988 396 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx55Q6ZPL9 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ddx55Q6ZPL9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ddx55Q6ZPL9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ddx55Q6ZPL9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm11380-201ENSMUST00000118067 560 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Mir6953-201ENSMUST00000184745 68 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm9353-201ENSMUST00000200472 604 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm7880-201ENSMUST00000203748 871 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx55Q6ZPL9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.88□□□□□ -0.35
Ddx55Q6ZPL9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms