Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm25492-201ENSMUST00000157383 129 ntBASIC12.68□□□□□ -0.38
Usp49Q6P9L4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.68□□□□□ -0.38
Usp49Q6P9L4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp49Q6P9L4 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm4654-201ENSMUST00000183305 982 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Mir6546-201ENSMUST00000184460 62 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm29067-201ENSMUST00000190821 470 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp49Q6P9L4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm15573-201ENSMUST00000119487 540 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm4726-201ENSMUST00000135604 736 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm10051-201ENSMUST00000145209 414 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm6019-201ENSMUST00000148369 736 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm37981-201ENSMUST00000194280 535 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm45118-201ENSMUST00000208928 825 ntBASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp49Q6P9L4 Spcs1-203ENSMUST00000226374 592 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms