Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Gm42971-201ENSMUST00000199228 2079 ntBASIC13.13□□□□□ -0.31
Scn9aQ62205 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Scn9aQ62205 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn9aQ62205 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm15626-201ENSMUST00000117478 868 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm17782-201ENSMUST00000174345 880 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm7255-201ENSMUST00000187371 908 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Platr10-202ENSMUST00000191479 818 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.12□□□□□ -0.31
Scn9aQ62205 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm8725-201ENSMUST00000221829 1333 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm40414-201ENSMUST00000197608 481 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.12□□□□□ -0.31
Scn9aQ62205 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn9aQ62205 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn9aQ62205 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm14639-201ENSMUST00000120850 866 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm7805-201ENSMUST00000154348 448 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.11□□□□□ -0.31
Scn9aQ62205 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm18256-201ENSMUST00000209087 907 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm5764-201ENSMUST00000118817 885 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm6038-201ENSMUST00000154310 948 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn9aQ62205 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC13.11□□□□□ -0.31
Scn9aQ62205 Gm38103-201ENSMUST00000191707 864 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 BB187690-201ENSMUST00000198619 1176 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.11□□□□□ -0.31
Scn9aQ62205 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms